SNP Profiles matching ICS 75

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 Key

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_Input profile
CTACCCGTCTAGACCCAACTAAAAATCG
1._SCA_11
__CCTTCT_ACCCAACT__AT_
 1516171819202122232425262728
_Input profile
AGCCTTTTCCCCCTCTTTGTGGGTCCCG
1._SCA_11
AGCCTTTTCCCC_CC_GG___CG
 29303132333435363738394041 
_Input profile
CGCCAACTGTAGATGTCCCTCTGGAAX_X
1._SCA_11
_CCAACT___GG__CTGGAAX_X

Input profile: ICS_75 RUQ_818

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._SCA_11

91.7 %
24 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
 Dapeng Zhang, 2016

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP1060 33TcSNP1063 34TcSNP1111 35TcSNP1126
36TcSNP1253 37TcSNP1309 38TcSNP1439 39TcSNP1442 40TcSNP1458
41TcSNP1484